The Art of Data Partitioning in Supervised Machine Learning
- vazquezgz
- Oct 1, 2023
- 5 min read
Updated: Mar 4, 2024

Data partitioning is a pivotal step in the realm of supervised machine learning. It involves the division of your dataset into distinct subsets, each serving a unique purpose in the model development process. In this article, we'll delve deep into the significance of data partitioning and explore the best techniques to perform it effectively. We will also provide practical Python examples to illustrate the process. However, before we dive into the intricacies of data partitioning, it is paramount to understand why this step is indispensable and why clean data is an absolute prerequisite.
The Importance of Data Partitioning
At its core, supervised learning involves training a machine learning model on a portion of the data and testing it on another, unseen portion. This separation is crucial for assessing a model's performance and ensuring that it generalizes well to new, unseen data. Without proper data partitioning, a model may learn noise instead of patterns, leading to poor generalization and inaccurate predictions. Therefore, the significance of data partitioning cannot be overstated.
However, data partitioning's effectiveness is contingent on one crucial factor: clean data. Clean data is devoid of errors, missing values, and outliers, making it a faithful representation of the real-world problem you're trying to solve. When data is riddled with inconsistencies, the model may struggle to discern meaningful patterns, and its predictions may be unreliable. Thus, thorough data cleaning is a prerequisite before embarking on data partitioning.
Data cleaning involves tasks such as handling missing values, removing outliers, and addressing data inconsistencies. It is essential to ensure that the data used for training and testing accurately represents the problem you intend to solve. Data cleaning can be a time-consuming process, but it pays off by significantly improving the quality of your machine learning model.
The Best Way to Partition Data

Having emphasized the importance of clean data, let's delve into the best practices for partitioning your dataset effectively. A common and highly recommended approach is the train-validation-test split, often using ratios like 70-15-15 or 80-10-10 for the three subsets, respectively.
Here's how to perform a train-validation-test split in Python using the popular library scikit-learn, along with explanations for the variables used:
from sklearn.model_selection import train_test_split
# X represents the features, and y is the target variable
# test_size specifies the proportion of the dataset to include in the test set (30% in this case)
# random_state ensures reproducibility by fixing the random seed
X_train, X_temp, y_train, y_temp = train_test_split(X, y, test_size=0.3, random_state=42)
# Further split the temporary set into a validation set (15%) and a test set (15%)
X_val, X_test, y_val, y_test = train_test_split(X_temp, y_temp, test_size=0.15, random_state=42)
In this script:
X represents the features of your dataset.
y is the target variable or labels.
test_size specifies the proportion of the dataset to include in the test set. Here, we've chosen 30%, so the training set will comprise 70% of the data, and the test set will contain 30%.
random_state ensures reproducibility by fixing the random seed. It ensures that the same random split is produced each time you run the script, making your experiments reproducible.
The script divides your data into a training set (X_train and y_train), a validation set (X_val and y_val), and a test set (X_test and y_test). The training set is used to train your machine learning model, the validation set is used to fine-tune hyperparameters and assess model performance during training, and the test set remains entirely separate for a final, unbiased evaluation.
Unveiling the Magic of train_test_split
The train_test_split function in Python's scikit-learn library is a powerful tool for achieving this split while maintaining data distribution. To understand how it maintains data distribution, let's delve into the underlying statistical analysis.
When you call train_test_split, it takes your dataset and randomly shuffles it. This shuffling is essential to ensure that the data points are not ordered in any specific way that might bias the split. Once shuffled, the function will divide the data according to the specified ratios.
Here's a simplified breakdown of the process:
Shuffling: The function starts by randomly shuffling the dataset. This step is crucial because, in some cases, your data might be ordered (e.g., samples are sorted by class), and shuffling ensures that the split is representative.
Splitting: After shuffling, the function splits the data into training and temporary sets according to the specified test_size. For instance, if you set test_size=0.3, 30% of the shuffled data will be allocated to the temporary set, and the rest (70%) will become the training set.
Further Splitting: The temporary set is further split into validation and test sets, again maintaining the shuffled order. If you set test_size=0.5, this step ensures that 50% of the temporary set becomes the validation set, and the remaining 50% becomes the test set.
The random_state parameter ensures that the shuffle and split processes are reproducible. By setting a fixed random seed (e.g., random_state=42), you can ensure that the same shuffle and split will occur every time you run the code, which is crucial for reproducibility in machine learning experiments.
Maintaining data distribution during the split is crucial to ensure that each subset accurately represents the original dataset's characteristics. For example, if your dataset contains imbalanced classes (one class has significantly more samples than the others), you want to ensure that each subset (training, validation, and test) reflects this imbalance. If the data distribution is not preserved, you might end up with subsets that are not representative of the overall data, leading to biased model training and evaluation.
Data Partitioning for Model Excellence
In the world of supervised machine learning, data partitioning stands as a fundamental pillar for building robust models. It's not just a technical step; it's an art form that requires finesse and attention to detail. The efficacy of data partitioning hinges on clean, high-quality data, which serves as the foundation for model development.
Data cleaning, with its intricate tasks and meticulous attention to detail, may seem laborious. Still, it is a prerequisite that cannot be overlooked. Clean data ensures that the patterns your model learns are genuine, leading to more accurate predictions and better generalization to new data.
The train-validation-test split, a widely adopted practice, strikes an ideal balance between model training and evaluation. It enables you to iteratively refine your model, fine-tuning hyperparameters based on performance in the validation set. The test set, kept entirely separate, provides a final, unbiased assessment of your model's capabilities.
Moreover, understanding how the train_test_split algorithm maintains data distribution during the split is vital for ensuring that your model is not biased by skewed subsets. This statistical analysis, coupled with clean data and a well-structured partitioning strategy, sets the stage for successful model development.
In conclusion, data partitioning is not a mere technicality; it is the linchpin of supervised machine learning. To harness the power of machine learning models, one must master the art of data partitioning, starting with data cleaning and culminating in a well-structured train-validation-test split. With this knowledge in hand, you'll be well-equipped to embark on your journey to building reliable, accurate, and powerful supervised learning models.
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